Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.43■□□□□ 0.06
Slc6a13P31649 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.43■□□□□ 0.06
Slc6a13P31649 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Slc6a13P31649 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Slc6a13P31649 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Slc6a13P31649 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a13P31649 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.42■□□□□ 0.06
Slc6a13P31649 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Slc6a13P31649 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a13P31649 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.42■□□□□ 0.06
Slc6a13P31649 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.41■□□□□ 0.06
Slc6a13P31649 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.41■□□□□ 0.06
Slc6a13P31649 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.41■□□□□ 0.06
Slc6a13P31649 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.41■□□□□ 0.06
Slc6a13P31649 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a13P31649 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a13P31649 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a13P31649 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Slc6a13P31649 Gm1401-201ENSMUST00000122048 772 ntBASIC15.4■□□□□ 0.06
Slc6a13P31649 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.4■□□□□ 0.06
Slc6a13P31649 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.4■□□□□ 0.06
Slc6a13P31649 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.4■□□□□ 0.06
Slc6a13P31649 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms