Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.8□□□□□ -0.2
VtnP29788 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VtnP29788 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VtnP29788 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Gm11764-201ENSMUST00000120221 623 ntBASIC13.79□□□□□ -0.2
VtnP29788 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.79□□□□□ -0.2
VtnP29788 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.79□□□□□ -0.2
VtnP29788 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Gm43575-201ENSMUST00000196420 516 ntBASIC13.79□□□□□ -0.2
VtnP29788 Gm9682-201ENSMUST00000197505 556 ntBASIC13.79□□□□□ -0.2
VtnP29788 Gm45167-201ENSMUST00000208007 322 ntBASIC13.79□□□□□ -0.2
VtnP29788 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.79□□□□□ -0.2
VtnP29788 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.79□□□□□ -0.2
VtnP29788 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
VtnP29788 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.79□□□□□ -0.2
VtnP29788 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VtnP29788 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VtnP29788 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VtnP29788 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.78□□□□□ -0.2
VtnP29788 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.78□□□□□ -0.2
VtnP29788 Gm7787-201ENSMUST00000216858 688 ntBASIC13.78□□□□□ -0.2
VtnP29788 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VtnP29788 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VtnP29788 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VtnP29788 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VtnP29788 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
VtnP29788 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VtnP29788 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VtnP29788 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VtnP29788 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VtnP29788 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.77□□□□□ -0.21
VtnP29788 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VtnP29788 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VtnP29788 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.77□□□□□ -0.21
VtnP29788 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
VtnP29788 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VtnP29788 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VtnP29788 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms