Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.12□□□□□ -0.15
Nedd8P29595 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.12□□□□□ -0.15
Nedd8P29595 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.12□□□□□ -0.15
Nedd8P29595 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nedd8P29595 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nedd8P29595 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nedd8P29595 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nedd8P29595 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.11□□□□□ -0.15
Nedd8P29595 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.11□□□□□ -0.15
Nedd8P29595 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nedd8P29595 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nedd8P29595 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Gm29707-201ENSMUST00000196325 491 ntBASIC14.1□□□□□ -0.15
Nedd8P29595 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nedd8P29595 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nedd8P29595 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nedd8P29595 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.09□□□□□ -0.15
Nedd8P29595 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.09□□□□□ -0.15
Nedd8P29595 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.09□□□□□ -0.15
Nedd8P29595 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.09□□□□□ -0.15
Nedd8P29595 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nedd8P29595 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nedd8P29595 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms