Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RxrbP28704 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RxrbP28704 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RxrbP28704 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.28■□□□□ 0.04
RxrbP28704 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.28■□□□□ 0.04
RxrbP28704 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.28■□□□□ 0.04
RxrbP28704 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.28■□□□□ 0.04
RxrbP28704 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RxrbP28704 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.28■□□□□ 0.04
RxrbP28704 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RxrbP28704 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RxrbP28704 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RxrbP28704 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.28■□□□□ 0.04
RxrbP28704 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RxrbP28704 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.27■□□□□ 0.04
RxrbP28704 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RxrbP28704 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RxrbP28704 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Gm11950-201ENSMUST00000121615 838 ntBASIC15.27■□□□□ 0.04
RxrbP28704 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.27■□□□□ 0.04
RxrbP28704 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.27■□□□□ 0.04
RxrbP28704 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RxrbP28704 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.27■□□□□ 0.04
RxrbP28704 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RxrbP28704 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.27■□□□□ 0.04
RxrbP28704 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RxrbP28704 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RxrbP28704 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RxrbP28704 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RxrbP28704 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RxrbP28704 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RxrbP28704 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RxrbP28704 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
RxrbP28704 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.26■□□□□ 0.03
RxrbP28704 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.26■□□□□ 0.03
RxrbP28704 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RxrbP28704 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
RxrbP28704 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.26■□□□□ 0.03
RxrbP28704 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RxrbP28704 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.26■□□□□ 0.03
RxrbP28704 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RxrbP28704 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms