Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.6■□□□□ 0.25
Pde6bP23440 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.6■□□□□ 0.25
Pde6bP23440 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.6■□□□□ 0.25
Pde6bP23440 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.6■□□□□ 0.25
Pde6bP23440 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.6■□□□□ 0.25
Pde6bP23440 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pde6bP23440 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.6■□□□□ 0.25
Pde6bP23440 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.59■□□□□ 0.25
Pde6bP23440 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.59■□□□□ 0.25
Pde6bP23440 Gm45612-201ENSMUST00000211320 160 ntBASIC16.59■□□□□ 0.25
Pde6bP23440 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.59■□□□□ 0.25
Pde6bP23440 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pde6bP23440 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.59■□□□□ 0.25
Pde6bP23440 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Pde6bP23440 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.59■□□□□ 0.25
Pde6bP23440 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6bP23440 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.59■□□□□ 0.25
Pde6bP23440 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pde6bP23440 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pde6bP23440 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pde6bP23440 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.58■□□□□ 0.25
Pde6bP23440 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pde6bP23440 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pde6bP23440 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pde6bP23440 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pde6bP23440 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pde6bP23440 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pde6bP23440 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.58■□□□□ 0.24
Pde6bP23440 Thap2-203ENSMUST00000218989 527 ntBASIC16.58■□□□□ 0.24
Pde6bP23440 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.58■□□□□ 0.24
Pde6bP23440 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6bP23440 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.57■□□□□ 0.24
Pde6bP23440 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pde6bP23440 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Pde6bP23440 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.57■□□□□ 0.24
Pde6bP23440 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pde6bP23440 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.57■□□□□ 0.24
Pde6bP23440 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.57■□□□□ 0.24
Pde6bP23440 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pde6bP23440 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6bP23440 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pde6bP23440 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Pde6bP23440 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.56■□□□□ 0.24
Pde6bP23440 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms