Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Gm8344-201ENSMUST00000119813 856 ntBASIC13.68□□□□□ -0.22
Cd48P18181 Gm12497-201ENSMUST00000138778 237 ntBASIC13.68□□□□□ -0.22
Cd48P18181 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cd48P18181 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cd48P18181 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cd48P18181 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.68□□□□□ -0.22
Cd48P18181 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.68□□□□□ -0.22
Cd48P18181 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.68□□□□□ -0.22
Cd48P18181 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cd48P18181 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.68□□□□□ -0.22
Cd48P18181 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cd48P18181 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.68□□□□□ -0.22
Cd48P18181 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cd48P18181 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cd48P18181 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Cd48P18181 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cd48P18181 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cd48P18181 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cd48P18181 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Olfr129-201ENSMUST00000122318 993 ntBASIC13.67□□□□□ -0.22
Cd48P18181 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cd48P18181 Gm27704-201ENSMUST00000185094 107 ntBASIC13.67□□□□□ -0.22
Cd48P18181 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.67□□□□□ -0.22
Cd48P18181 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.67□□□□□ -0.22
Cd48P18181 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cd48P18181 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd48P18181 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd48P18181 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Cd48P18181 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.66□□□□□ -0.22
Cd48P18181 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Cd48P18181 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cd48P18181 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cd48P18181 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.66□□□□□ -0.22
Cd48P18181 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cd48P18181 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cd48P18181 Gm15372-201ENSMUST00000120729 834 ntBASIC13.66□□□□□ -0.22
Cd48P18181 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd48P18181 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.66□□□□□ -0.22
Cd48P18181 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.66□□□□□ -0.22
Cd48P18181 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.66□□□□□ -0.22
Cd48P18181 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd48P18181 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms