Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.23■□□□□ 0.35
Kcna1P16388 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.23■□□□□ 0.35
Kcna1P16388 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.23■□□□□ 0.35
Kcna1P16388 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.23■□□□□ 0.35
Kcna1P16388 Thap2-203ENSMUST00000218989 527 ntBASIC17.23■□□□□ 0.35
Kcna1P16388 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.23■□□□□ 0.35
Kcna1P16388 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.23■□□□□ 0.35
Kcna1P16388 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Kcna1P16388 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Kcna1P16388 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.22■□□□□ 0.35
Kcna1P16388 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.22■□□□□ 0.35
Kcna1P16388 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Kcna1P16388 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.22■□□□□ 0.35
Kcna1P16388 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Kcna1P16388 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.22■□□□□ 0.35
Kcna1P16388 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcna1P16388 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.21■□□□□ 0.35
Kcna1P16388 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Kcna1P16388 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.21■□□□□ 0.35
Kcna1P16388 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Kcna1P16388 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Kcna1P16388 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.21■□□□□ 0.35
Kcna1P16388 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Kcna1P16388 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcna1P16388 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Kcna1P16388 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Kcna1P16388 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Kcna1P16388 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Kcna1P16388 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.2■□□□□ 0.34
Kcna1P16388 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.2■□□□□ 0.34
Kcna1P16388 Gm27301-201ENSMUST00000184012 127 ntBASIC17.2■□□□□ 0.34
Kcna1P16388 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.2■□□□□ 0.34
Kcna1P16388 Gm20553-201ENSMUST00000204205 844 ntBASIC17.2■□□□□ 0.34
Kcna1P16388 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Kcna1P16388 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Kcna1P16388 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Kcna1P16388 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Kcna1P16388 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcna1P16388 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Kcna1P16388 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Kcna1P16388 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Kcna1P16388 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Kcna1P16388 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Kcna1P16388 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.19■□□□□ 0.34
Kcna1P16388 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Kcna1P16388 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms