Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp53P15975 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp53P15975 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp53P15975 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.55■□□□□ 0.4
Usp53P15975 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp53P15975 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp53P15975 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp53P15975 Gm13365-201ENSMUST00000121188 973 ntBASIC17.55■□□□□ 0.4
Usp53P15975 Gm11745-201ENSMUST00000121669 448 ntBASIC17.55■□□□□ 0.4
Usp53P15975 Gm11025-201ENSMUST00000140773 466 ntBASIC17.55■□□□□ 0.4
Usp53P15975 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp53P15975 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp53P15975 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp53P15975 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp53P15975 Gm45612-201ENSMUST00000211320 160 ntBASIC17.55■□□□□ 0.4
Usp53P15975 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp53P15975 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp53P15975 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp53P15975 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp53P15975 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.55■□□□□ 0.4
Usp53P15975 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.55■□□□□ 0.4
Usp53P15975 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp53P15975 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp53P15975 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp53P15975 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.54■□□□□ 0.4
Usp53P15975 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.54■□□□□ 0.4
Usp53P15975 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp53P15975 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Usp53P15975 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Gm27494-201ENSMUST00000184735 189 ntBASIC17.54■□□□□ 0.4
Usp53P15975 Gm2272-201ENSMUST00000194903 582 ntBASIC17.54■□□□□ 0.4
Usp53P15975 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.54■□□□□ 0.4
Usp53P15975 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.54■□□□□ 0.4
Usp53P15975 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp53P15975 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp53P15975 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp53P15975 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Usp53P15975 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp53P15975 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp53P15975 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Usp53P15975 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp53P15975 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp53P15975 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Usp53P15975 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.53■□□□□ 0.4
Usp53P15975 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp53P15975 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp53P15975 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp53P15975 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Usp53P15975 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms