Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Rb1P13405 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.58■□□□□ 0.08
Rb1P13405 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.58■□□□□ 0.08
Rb1P13405 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.58■□□□□ 0.08
Rb1P13405 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.58■□□□□ 0.08
Rb1P13405 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.58■□□□□ 0.08
Rb1P13405 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.58■□□□□ 0.08
Rb1P13405 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rb1P13405 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rb1P13405 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.57■□□□□ 0.08
Rb1P13405 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.57■□□□□ 0.08
Rb1P13405 Gm18622-201ENSMUST00000219361 595 ntBASIC15.57■□□□□ 0.08
Rb1P13405 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rb1P13405 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.57■□□□□ 0.08
Rb1P13405 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.57■□□□□ 0.08
Rb1P13405 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.57■□□□□ 0.08
Rb1P13405 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rb1P13405 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Rb1P13405 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.57■□□□□ 0.08
Rb1P13405 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rb1P13405 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rb1P13405 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Rb1P13405 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.56■□□□□ 0.08
Rb1P13405 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Rb1P13405 Gm7063-201ENSMUST00000186840 981 ntBASIC15.56■□□□□ 0.08
Rb1P13405 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.56■□□□□ 0.08
Rb1P13405 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.56■□□□□ 0.08
Rb1P13405 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rb1P13405 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rb1P13405 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rb1P13405 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rb1P13405 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rb1P13405 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.55■□□□□ 0.08
Rb1P13405 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rb1P13405 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.55■□□□□ 0.08
Rb1P13405 Gm11025-201ENSMUST00000140773 466 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms