Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col1a1P11087 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.64■□□□□ 0.41
Col1a1P11087 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col1a1P11087 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm23984-201ENSMUST00000157139 203 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col1a1P11087 Gm29310-201ENSMUST00000185468 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21825-201ENSMUST00000185728 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm29109-201ENSMUST00000185895 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21896-201ENSMUST00000186520 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21873-201ENSMUST00000186728 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21794-201ENSMUST00000187056 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21880-201ENSMUST00000187275 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21826-201ENSMUST00000187451 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21198-201ENSMUST00000188393 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21749-201ENSMUST00000189343 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21901-201ENSMUST00000189568 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm29424-201ENSMUST00000189716 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm28599-201ENSMUST00000189838 694 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21867-201ENSMUST00000189917 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm29269-201ENSMUST00000190087 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21722-201ENSMUST00000190153 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm28423-201ENSMUST00000190701 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21899-201ENSMUST00000190745 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21910-201ENSMUST00000191163 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21849-201ENSMUST00000191571 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm28678-201ENSMUST00000191593 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm20910-201ENSMUST00000193268 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm21871-201ENSMUST00000194621 696 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col1a1P11087 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col1a1P11087 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Col1a1P11087 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.63■□□□□ 0.41
Col1a1P11087 Gm46209-201ENSMUST00000217912 553 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.63■□□□□ 0.41
Col1a1P11087 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.63■□□□□ 0.41
Col1a1P11087 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Gm25857-201ENSMUST00000082788 129 ntBASIC17.63■□□□□ 0.41
Col1a1P11087 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col1a1P11087 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col1a1P11087 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col1a1P11087 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col1a1P11087 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col1a1P11087 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Col1a1P11087 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col1a1P11087 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col1a1P11087 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col1a1P11087 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.62■□□□□ 0.41
Col1a1P11087 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.62■□□□□ 0.41
Col1a1P11087 Gm11478-201ENSMUST00000117851 599 ntBASIC17.62■□□□□ 0.41
Col1a1P11087 Gm6222-201ENSMUST00000120787 396 ntBASIC17.62■□□□□ 0.41
Col1a1P11087 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.62■□□□□ 0.41
Col1a1P11087 Gm18018-201ENSMUST00000198273 408 ntBASIC17.62■□□□□ 0.41
Col1a1P11087 Gm45384-201ENSMUST00000210451 277 ntBASIC17.62■□□□□ 0.41
Col1a1P11087 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col1a1P11087 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col1a1P11087 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col1a1P11087 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
Col1a1P11087 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Col1a1P11087 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.61■□□□□ 0.41
Col1a1P11087 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col1a1P11087 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col1a1P11087 Mir1897-201ENSMUST00000122581 272 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms