Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc6P10629 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc6P10629 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc6P10629 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Hoxc6P10629 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc6P10629 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc6P10629 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc6P10629 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.83■□□□□ 0.28
Hoxc6P10629 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc6P10629 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc6P10629 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.83■□□□□ 0.28
Hoxc6P10629 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.83■□□□□ 0.28
Hoxc6P10629 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Hoxc6P10629 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc6P10629 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc6P10629 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc6P10629 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hoxc6P10629 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc6P10629 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Hoxc6P10629 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Hoxc6P10629 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Gm27920-201ENSMUST00000183953 96 ntBASIC16.82■□□□□ 0.28
Hoxc6P10629 Gm18766-201ENSMUST00000189811 808 ntBASIC16.82■□□□□ 0.28
Hoxc6P10629 Gm43438-201ENSMUST00000198133 379 ntBASIC16.82■□□□□ 0.28
Hoxc6P10629 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc6P10629 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxc6P10629 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Hoxc6P10629 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.81■□□□□ 0.28
Hoxc6P10629 Gm27680-201ENSMUST00000184192 160 ntBASIC16.81■□□□□ 0.28
Hoxc6P10629 Gm9063-201ENSMUST00000223299 582 ntBASIC16.81■□□□□ 0.28
Hoxc6P10629 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc6P10629 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.8■□□□□ 0.28
Hoxc6P10629 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxc6P10629 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hoxc6P10629 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Gm13823-201ENSMUST00000119930 345 ntBASIC16.8■□□□□ 0.28
Hoxc6P10629 Gm14767-201ENSMUST00000121559 586 ntBASIC16.8■□□□□ 0.28
Hoxc6P10629 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Hoxc6P10629 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Hoxc6P10629 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hoxc6P10629 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxc6P10629 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc6P10629 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Hoxc6P10629 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hoxc6P10629 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc6P10629 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc6P10629 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc6P10629 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hoxc6P10629 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Hoxc6P10629 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms