Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
P06344 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.55□□□□□ -0.24
P06344 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.55□□□□□ -0.24
P06344 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.55□□□□□ -0.24
P06344 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.55□□□□□ -0.24
P06344 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Gm37935-201ENSMUST00000192012 982 ntBASIC13.55□□□□□ -0.24
P06344 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.55□□□□□ -0.24
P06344 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.55□□□□□ -0.24
P06344 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.55□□□□□ -0.24
P06344 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.55□□□□□ -0.24
P06344 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
P06344 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
P06344 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
P06344 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.55□□□□□ -0.24
P06344 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
P06344 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
P06344 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.55□□□□□ -0.24
P06344 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
P06344 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.54□□□□□ -0.24
P06344 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
P06344 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
P06344 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.54□□□□□ -0.24
P06344 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
P06344 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
P06344 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.54□□□□□ -0.24
P06344 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.54□□□□□ -0.24
P06344 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.54□□□□□ -0.24
P06344 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.54□□□□□ -0.24
P06344 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
P06344 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.54□□□□□ -0.24
P06344 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06344 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.53□□□□□ -0.24
P06344 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
P06344 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.53□□□□□ -0.24
P06344 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
P06344 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
P06344 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.53□□□□□ -0.24
P06344 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.53□□□□□ -0.24
P06344 Gm13597-201ENSMUST00000121239 375 ntBASIC13.53□□□□□ -0.24
P06344 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
P06344 Mir3113-201ENSMUST00000175478 76 ntBASIC13.53□□□□□ -0.24
P06344 Mir8117-201ENSMUST00000184773 107 ntBASIC13.53□□□□□ -0.24
P06344 Gm2213-201ENSMUST00000197485 688 ntBASIC13.53□□□□□ -0.24
P06344 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
P06344 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
P06344 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.53□□□□□ -0.24
P06344 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.53□□□□□ -0.24
P06344 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms