Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
P01734 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.53■□□□□ 0.24
P01734 Gm5177-201ENSMUST00000183092 997 ntBASIC16.53■□□□□ 0.24
P01734 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.53■□□□□ 0.24
P01734 Gm44492-201ENSMUST00000197012 141 ntBASIC16.53■□□□□ 0.24
P01734 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.53■□□□□ 0.24
P01734 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.53■□□□□ 0.24
P01734 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
P01734 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
P01734 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P01734 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.52■□□□□ 0.24
P01734 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
P01734 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.52■□□□□ 0.24
P01734 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.52■□□□□ 0.24
P01734 Gm12008-201ENSMUST00000117791 755 ntBASIC16.52■□□□□ 0.24
P01734 Gm25911-201ENSMUST00000157621 56 ntBASIC16.52■□□□□ 0.24
P01734 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.52■□□□□ 0.24
P01734 Gm37935-201ENSMUST00000192012 982 ntBASIC16.52■□□□□ 0.24
P01734 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.52■□□□□ 0.24
P01734 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01734 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P01734 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P01734 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P01734 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
P01734 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
P01734 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.51■□□□□ 0.23
P01734 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
P01734 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Gm2213-201ENSMUST00000197485 688 ntBASIC16.51■□□□□ 0.23
P01734 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Gm45747-201ENSMUST00000212203 999 ntBASIC16.51■□□□□ 0.23
P01734 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01734 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P01734 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.5■□□□□ 0.23
P01734 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.5■□□□□ 0.23
P01734 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
P01734 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.5■□□□□ 0.23
P01734 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
P01734 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.5■□□□□ 0.23
P01734 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.5■□□□□ 0.23
P01734 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01734 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.49■□□□□ 0.23
P01734 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01734 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01734 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms