Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Abcd4O89016 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Abcd4O89016 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Abcd4O89016 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.79□□□□□ -0.2
Abcd4O89016 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Gm15358-201ENSMUST00000119249 520 ntBASIC13.79□□□□□ -0.2
Abcd4O89016 Gm5682-201ENSMUST00000173402 505 ntBASIC13.79□□□□□ -0.2
Abcd4O89016 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.79□□□□□ -0.2
Abcd4O89016 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.79□□□□□ -0.2
Abcd4O89016 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abcd4O89016 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Abcd4O89016 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.78□□□□□ -0.2
Abcd4O89016 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Abcd4O89016 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.78□□□□□ -0.2
Abcd4O89016 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.78□□□□□ -0.2
Abcd4O89016 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.78□□□□□ -0.2
Abcd4O89016 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.78□□□□□ -0.2
Abcd4O89016 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.78□□□□□ -0.2
Abcd4O89016 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Abcd4O89016 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Abcd4O89016 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Abcd4O89016 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abcd4O89016 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abcd4O89016 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abcd4O89016 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abcd4O89016 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
Abcd4O89016 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abcd4O89016 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abcd4O89016 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.77□□□□□ -0.21
Abcd4O89016 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Abcd4O89016 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Abcd4O89016 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.77□□□□□ -0.21
Abcd4O89016 Gm14822-201ENSMUST00000122247 291 ntBASIC13.77□□□□□ -0.21
Abcd4O89016 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.77□□□□□ -0.21
Abcd4O89016 Mir3113-201ENSMUST00000175478 76 ntBASIC13.77□□□□□ -0.21
Abcd4O89016 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Abcd4O89016 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.77□□□□□ -0.21
Abcd4O89016 Mir8117-201ENSMUST00000184773 107 ntBASIC13.77□□□□□ -0.21
Abcd4O89016 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.77□□□□□ -0.21
Abcd4O89016 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Abcd4O89016 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.77□□□□□ -0.21
Abcd4O89016 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Abcd4O89016 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms