Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Best1O88870 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Best1O88870 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Best1O88870 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Best1O88870 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.57□□□□□ -0.08
Best1O88870 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
Best1O88870 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.57□□□□□ -0.08
Best1O88870 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Best1O88870 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Best1O88870 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.57□□□□□ -0.08
Best1O88870 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Best1O88870 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Best1O88870 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.56□□□□□ -0.08
Best1O88870 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.56□□□□□ -0.08
Best1O88870 Gm6973-201ENSMUST00000117080 721 ntBASIC14.56□□□□□ -0.08
Best1O88870 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
Best1O88870 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.56□□□□□ -0.08
Best1O88870 Gm44335-201ENSMUST00000196879 141 ntBASIC14.56□□□□□ -0.08
Best1O88870 Gm44297-201ENSMUST00000198304 141 ntBASIC14.56□□□□□ -0.08
Best1O88870 Gm44346-201ENSMUST00000198851 141 ntBASIC14.56□□□□□ -0.08
Best1O88870 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Best1O88870 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Best1O88870 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.56□□□□□ -0.08
Best1O88870 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.56□□□□□ -0.08
Best1O88870 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.56□□□□□ -0.08
Best1O88870 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.56□□□□□ -0.08
Best1O88870 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Best1O88870 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Best1O88870 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.56□□□□□ -0.08
Best1O88870 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.55□□□□□ -0.08
Best1O88870 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Best1O88870 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Gm11543-201ENSMUST00000120758 370 ntBASIC14.55□□□□□ -0.08
Best1O88870 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Gm5312-201ENSMUST00000203728 547 ntBASIC14.55□□□□□ -0.08
Best1O88870 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.55□□□□□ -0.08
Best1O88870 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.55□□□□□ -0.08
Best1O88870 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Best1O88870 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Best1O88870 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Best1O88870 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Best1O88870 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Best1O88870 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms