Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cops4O88544 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cops4O88544 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops4O88544 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops4O88544 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops4O88544 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cops4O88544 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops4O88544 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.08□□□□□ -0.16
Cops4O88544 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cops4O88544 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.07□□□□□ -0.16
Cops4O88544 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cops4O88544 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops4O88544 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops4O88544 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cops4O88544 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cops4O88544 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.06□□□□□ -0.16
Cops4O88544 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cops4O88544 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cops4O88544 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cops4O88544 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Cops4O88544 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.06□□□□□ -0.16
Cops4O88544 Mir6404-201ENSMUST00000183699 94 ntBASIC14.06□□□□□ -0.16
Cops4O88544 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Gm44430-201ENSMUST00000203376 995 ntBASIC14.06□□□□□ -0.16
Cops4O88544 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Cops4O88544 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.06□□□□□ -0.16
Cops4O88544 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.06□□□□□ -0.16
Cops4O88544 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops4O88544 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Cops4O88544 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cops4O88544 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Mir770-201ENSMUST00000103252 94 ntBASIC14.05□□□□□ -0.16
Cops4O88544 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms