Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cacna1hO88427 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.7□□□□□ -0.06
Cacna1hO88427 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cacna1hO88427 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cacna1hO88427 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1hO88427 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.69□□□□□ -0.06
Cacna1hO88427 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.69□□□□□ -0.06
Cacna1hO88427 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.69□□□□□ -0.06
Cacna1hO88427 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.69□□□□□ -0.06
Cacna1hO88427 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.69□□□□□ -0.06
Cacna1hO88427 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.69□□□□□ -0.06
Cacna1hO88427 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Cacna1hO88427 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Gm6244-201ENSMUST00000178732 841 ntBASIC14.69□□□□□ -0.06
Cacna1hO88427 Gm19220-201ENSMUST00000222682 803 ntBASIC14.69□□□□□ -0.06
Cacna1hO88427 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.69□□□□□ -0.06
Cacna1hO88427 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.69□□□□□ -0.06
Cacna1hO88427 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cacna1hO88427 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.68□□□□□ -0.06
Cacna1hO88427 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.68□□□□□ -0.06
Cacna1hO88427 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.68□□□□□ -0.06
Cacna1hO88427 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.68□□□□□ -0.06
Cacna1hO88427 Gm18054-201ENSMUST00000207539 555 ntBASIC14.68□□□□□ -0.06
Cacna1hO88427 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Cacna1hO88427 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cacna1hO88427 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.67□□□□□ -0.06
Cacna1hO88427 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms