Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nid2O88322 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nid2O88322 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Nid2O88322 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.59■□□□□ 0.73
Nid2O88322 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.59■□□□□ 0.73
Nid2O88322 Gm44719-201ENSMUST00000206404 149 ntBASIC19.59■□□□□ 0.73
Nid2O88322 Gm9908-201ENSMUST00000211534 448 ntBASIC19.59■□□□□ 0.73
Nid2O88322 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Nid2O88322 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Nid2O88322 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.58■□□□□ 0.73
Nid2O88322 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Nid2O88322 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Celf4-206ENSMUST00000224553 1729 ntBASIC19.58■□□□□ 0.73
Nid2O88322 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid2O88322 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Nid2O88322 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.58■□□□□ 0.73
Nid2O88322 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.58■□□□□ 0.72
Nid2O88322 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nid2O88322 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Nid2O88322 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Gm9522-201ENSMUST00000182394 926 ntBASIC19.58■□□□□ 0.72
Nid2O88322 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nid2O88322 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid2O88322 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nid2O88322 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nid2O88322 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nid2O88322 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Gm15823-201ENSMUST00000064305 670 ntBASIC19.57■□□□□ 0.72
Nid2O88322 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.57■□□□□ 0.72
Nid2O88322 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid2O88322 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nid2O88322 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.56■□□□□ 0.72
Nid2O88322 Gm27631-201ENSMUST00000184163 466 ntBASIC19.56■□□□□ 0.72
Nid2O88322 Mir7085-201ENSMUST00000184353 66 ntBASIC19.56■□□□□ 0.72
Nid2O88322 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.56■□□□□ 0.72
Nid2O88322 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.56■□□□□ 0.72
Nid2O88322 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nid2O88322 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.56■□□□□ 0.72
Nid2O88322 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms