Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Gm45504-201ENSMUST00000211407 2107 ntBASIC9.28□□□□□ -0.92
Gm10139O88245 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10139O88245 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10139O88245 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Gm10139O88245 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10139O88245 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10139O88245 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Gm10139O88245 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10139O88245 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10139O88245 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Gm12895-201ENSMUST00000122214 226 ntBASIC9.27□□□□□ -0.93
Gm10139O88245 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC9.27□□□□□ -0.93
Gm10139O88245 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Gm33142-201ENSMUST00000193913 867 ntBASIC9.27□□□□□ -0.93
Gm10139O88245 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Gm10139O88245 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Gm7901-201ENSMUST00000120430 1597 ntBASIC9.27□□□□□ -0.93
Gm10139O88245 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Gm10139O88245 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC9.27□□□□□ -0.93
Gm10139O88245 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
Gm10139O88245 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Gm10139O88245 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Gm10139O88245 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10139O88245 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Gm10139O88245 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Gm12620-201ENSMUST00000119791 1986 ntBASIC9.26□□□□□ -0.93
Gm10139O88245 Gm12612-201ENSMUST00000140182 1986 ntBASIC9.26□□□□□ -0.93
Gm10139O88245 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC9.26□□□□□ -0.93
Gm10139O88245 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Gm10139O88245 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.26□□□□□ -0.93
Gm10139O88245 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Gm10139O88245 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Gm10139O88245 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Gm10139O88245 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms