Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp8O70138 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp8O70138 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp8O70138 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp8O70138 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Mmp8O70138 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.52■□□□□ 0.56
Mmp8O70138 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Mmp8O70138 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Mmp8O70138 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Mmp8O70138 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.52■□□□□ 0.56
Mmp8O70138 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.52■□□□□ 0.56
Mmp8O70138 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp8O70138 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.52■□□□□ 0.56
Mmp8O70138 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.52■□□□□ 0.56
Mmp8O70138 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp8O70138 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp8O70138 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp8O70138 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp8O70138 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp8O70138 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Gm12260-201ENSMUST00000122447 411 ntBASIC18.51■□□□□ 0.55
Mmp8O70138 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Mmp8O70138 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Mmp8O70138 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Mmp8O70138 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Mmp8O70138 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp8O70138 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Gm43514-201ENSMUST00000198852 424 ntBASIC18.5■□□□□ 0.55
Mmp8O70138 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Mmp8O70138 Gm45747-201ENSMUST00000212203 999 ntBASIC18.5■□□□□ 0.55
Mmp8O70138 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.5■□□□□ 0.55
Mmp8O70138 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Mmp8O70138 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.5■□□□□ 0.55
Mmp8O70138 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.5■□□□□ 0.55
Mmp8O70138 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Mmp8O70138 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Mmp8O70138 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.5■□□□□ 0.55
Mmp8O70138 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp8O70138 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Mmp8O70138 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Mmp8O70138 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Mmp8O70138 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.49■□□□□ 0.55
Mmp8O70138 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.49■□□□□ 0.55
Mmp8O70138 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Mmp8O70138 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms