Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.67□□□□□ -0.06
Cacna1bO55017 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cacna1bO55017 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1bO55017 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.66□□□□□ -0.06
Cacna1bO55017 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cacna1bO55017 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cacna1bO55017 Gm14767-201ENSMUST00000121559 586 ntBASIC14.66□□□□□ -0.06
Cacna1bO55017 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.66□□□□□ -0.06
Cacna1bO55017 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.66□□□□□ -0.06
Cacna1bO55017 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
Cacna1bO55017 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.66□□□□□ -0.06
Cacna1bO55017 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Cacna1bO55017 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1bO55017 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Gm43433-201ENSMUST00000196573 481 ntBASIC14.65□□□□□ -0.06
Cacna1bO55017 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.65□□□□□ -0.06
Cacna1bO55017 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cacna1bO55017 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cacna1bO55017 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1bO55017 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1bO55017 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cacna1bO55017 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.64□□□□□ -0.07
Cacna1bO55017 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.64□□□□□ -0.07
Cacna1bO55017 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
Cacna1bO55017 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.64□□□□□ -0.07
Cacna1bO55017 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1bO55017 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1bO55017 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1bO55017 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1bO55017 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.64□□□□□ -0.07
Cacna1bO55017 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1bO55017 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms