Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf13O54965 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.81□□□□□ -0.2
Rnf13O54965 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.81□□□□□ -0.2
Rnf13O54965 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Gm25016-201ENSMUST00000158399 131 ntBASIC13.81□□□□□ -0.2
Rnf13O54965 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Rnf13O54965 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf13O54965 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf13O54965 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rnf13O54965 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.8□□□□□ -0.2
Rnf13O54965 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rnf13O54965 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Rnf13O54965 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Gm14722-201ENSMUST00000118943 689 ntBASIC13.8□□□□□ -0.2
Rnf13O54965 Gm13312-201ENSMUST00000119631 718 ntBASIC13.8□□□□□ -0.2
Rnf13O54965 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Gm17808-201ENSMUST00000200859 894 ntBASIC13.8□□□□□ -0.2
Rnf13O54965 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.8□□□□□ -0.2
Rnf13O54965 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.8□□□□□ -0.2
Rnf13O54965 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rnf13O54965 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.8□□□□□ -0.2
Rnf13O54965 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf13O54965 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf13O54965 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.79□□□□□ -0.2
Rnf13O54965 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rnf13O54965 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rnf13O54965 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf13O54965 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rnf13O54965 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rnf13O54965 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf13O54965 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms