Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.39■□□□□ 0.37
Stag2O35638 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Stag2O35638 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.39■□□□□ 0.37
Stag2O35638 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.39■□□□□ 0.37
Stag2O35638 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stag2O35638 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stag2O35638 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stag2O35638 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stag2O35638 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Stag2O35638 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Stag2O35638 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Stag2O35638 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Stag2O35638 Celf4-206ENSMUST00000224553 1729 ntBASIC17.38■□□□□ 0.37
Stag2O35638 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Stag2O35638 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.38■□□□□ 0.37
Stag2O35638 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Gm17271-201ENSMUST00000165535 355 ntBASIC17.38■□□□□ 0.37
Stag2O35638 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Stag2O35638 Gm27397-201ENSMUST00000184997 107 ntBASIC17.38■□□□□ 0.37
Stag2O35638 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.38■□□□□ 0.37
Stag2O35638 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Stag2O35638 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Stag2O35638 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.38■□□□□ 0.37
Stag2O35638 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Stag2O35638 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Stag2O35638 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Stag2O35638 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.37■□□□□ 0.37
Stag2O35638 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.37■□□□□ 0.37
Stag2O35638 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Gm24513-201ENSMUST00000174964 138 ntBASIC17.37■□□□□ 0.37
Stag2O35638 Gm43575-201ENSMUST00000196420 516 ntBASIC17.37■□□□□ 0.37
Stag2O35638 Gm20553-201ENSMUST00000204205 844 ntBASIC17.37■□□□□ 0.37
Stag2O35638 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Stag2O35638 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Asic1-205ENSMUST00000228185 1818 ntBASIC17.37■□□□□ 0.37
Stag2O35638 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
Stag2O35638 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.37■□□□□ 0.37
Stag2O35638 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.37■□□□□ 0.37
Stag2O35638 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Stag2O35638 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.36■□□□□ 0.37
Stag2O35638 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Stag2O35638 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.36■□□□□ 0.37
Stag2O35638 Gm15427-201ENSMUST00000117288 531 ntBASIC17.36■□□□□ 0.37
Stag2O35638 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.36■□□□□ 0.37
Stag2O35638 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.36■□□□□ 0.37
Stag2O35638 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.36■□□□□ 0.37
Stag2O35638 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.36■□□□□ 0.37
Stag2O35638 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.36■□□□□ 0.37
Stag2O35638 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.36■□□□□ 0.37
Stag2O35638 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.36■□□□□ 0.37
Stag2O35638 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Stag2O35638 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Stag2O35638 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms