Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.05□□□□□ -0.48
Efnb3O35393 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Efnb3O35393 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Efnb3O35393 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.05□□□□□ -0.48
Efnb3O35393 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Efnb3O35393 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Efnb3O35393 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Efnb3O35393 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.04□□□□□ -0.48
Efnb3O35393 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Efnb3O35393 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Efnb3O35393 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Efnb3O35393 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Efnb3O35393 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.04□□□□□ -0.48
Efnb3O35393 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Efnb3O35393 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Efnb3O35393 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Efnb3O35393 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.03□□□□□ -0.48
Efnb3O35393 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.03□□□□□ -0.48
Efnb3O35393 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Efnb3O35393 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.03□□□□□ -0.48
Efnb3O35393 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.03□□□□□ -0.48
Efnb3O35393 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.03□□□□□ -0.48
Efnb3O35393 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Efnb3O35393 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Efnb3O35393 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Efnb3O35393 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Efnb3O35393 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Efnb3O35393 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Efnb3O35393 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Efnb3O35393 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Efnb3O35393 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Efnb3O35393 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Efnb3O35393 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.02□□□□□ -0.48
Efnb3O35393 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Efnb3O35393 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Efnb3O35393 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Efnb3O35393 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Efnb3O35393 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Efnb3O35393 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.02□□□□□ -0.49
Efnb3O35393 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Efnb3O35393 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.02□□□□□ -0.49
Efnb3O35393 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.02□□□□□ -0.49
Efnb3O35393 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.02□□□□□ -0.49
Efnb3O35393 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.02□□□□□ -0.49
Efnb3O35393 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms