Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Alx4O35137 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Alx4O35137 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.57□□□□□ -0.24
Alx4O35137 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.57□□□□□ -0.24
Alx4O35137 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Gm23547-201ENSMUST00000158210 271 ntBASIC13.57□□□□□ -0.24
Alx4O35137 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.57□□□□□ -0.24
Alx4O35137 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.57□□□□□ -0.24
Alx4O35137 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.57□□□□□ -0.24
Alx4O35137 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Alx4O35137 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Alx4O35137 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Alx4O35137 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.56□□□□□ -0.24
Alx4O35137 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.56□□□□□ -0.24
Alx4O35137 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Alx4O35137 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.56□□□□□ -0.24
Alx4O35137 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.56□□□□□ -0.24
Alx4O35137 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.56□□□□□ -0.24
Alx4O35137 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.56□□□□□ -0.24
Alx4O35137 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.56□□□□□ -0.24
Alx4O35137 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Alx4O35137 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Alx4O35137 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Alx4O35137 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx4O35137 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Alx4O35137 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.56□□□□□ -0.24
Alx4O35137 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Alx4O35137 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx4O35137 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Gm12008-201ENSMUST00000117791 755 ntBASIC13.55□□□□□ -0.24
Alx4O35137 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.55□□□□□ -0.24
Alx4O35137 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Gm29518-201ENSMUST00000190858 372 ntBASIC13.55□□□□□ -0.24
Alx4O35137 Gm17808-201ENSMUST00000200859 894 ntBASIC13.55□□□□□ -0.24
Alx4O35137 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Alx4O35137 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Alx4O35137 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Alx4O35137 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx4O35137 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms