Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.66■□□□□ 0.1
Trove2O08848 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.66■□□□□ 0.1
Trove2O08848 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Gm6345-202ENSMUST00000180900 204 ntBASIC15.66■□□□□ 0.1
Trove2O08848 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Gm17808-201ENSMUST00000200859 894 ntBASIC15.66■□□□□ 0.1
Trove2O08848 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.66■□□□□ 0.1
Trove2O08848 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trove2O08848 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Trove2O08848 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trove2O08848 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trove2O08848 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.65■□□□□ 0.1
Trove2O08848 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Trove2O08848 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trove2O08848 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trove2O08848 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.65■□□□□ 0.1
Trove2O08848 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trove2O08848 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.64■□□□□ 0.1
Trove2O08848 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trove2O08848 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trove2O08848 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Trove2O08848 Gm29518-201ENSMUST00000190858 372 ntBASIC15.64■□□□□ 0.09
Trove2O08848 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Gm45328-201ENSMUST00000210942 917 ntBASIC15.64■□□□□ 0.09
Trove2O08848 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.64■□□□□ 0.09
Trove2O08848 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trove2O08848 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.64■□□□□ 0.09
Trove2O08848 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.64■□□□□ 0.09
Trove2O08848 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.64■□□□□ 0.09
Trove2O08848 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Trove2O08848 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trove2O08848 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trove2O08848 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.63■□□□□ 0.09
Trove2O08848 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trove2O08848 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Trove2O08848 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trove2O08848 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trove2O08848 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms