Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm26506-201ENSMUST00000179692 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm25086-201ENSMUST00000179931 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm23243-201ENSMUST00000180047 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24659-201ENSMUST00000180212 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24169-201ENSMUST00000180244 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm23689-201ENSMUST00000180354 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm27359-201ENSMUST00000184153 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm27785-201ENSMUST00000184268 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm27466-201ENSMUST00000184396 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm27703-201ENSMUST00000184836 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm7774-201ENSMUST00000200064 533 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 App-207ENSMUST00000227737 2827 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gm25287-201ENSMUST00000103846 110 ntBASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gm22918-201ENSMUST00000103855 110 ntBASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gm11543-201ENSMUST00000120758 370 ntBASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gm24158-201ENSMUST00000175263 71 ntBASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gm10253-201ENSMUST00000194270 940 ntBASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim34bJ3QNR8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
Trim34bJ3QNR8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim34bJ3QNR8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim34bJ3QNR8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim34bJ3QNR8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim34bJ3QNR8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms