Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-3J3QMG8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Gm45167-201ENSMUST00000208007 322 ntBASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Celf4-206ENSMUST00000224553 1729 ntBASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-3J3QMG8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-3J3QMG8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms