Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85cE9Q6B2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85cE9Q6B2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Gm42853-201ENSMUST00000201273 1387 ntBASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Gm27701-201ENSMUST00000184498 110 ntBASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Gm19220-201ENSMUST00000222682 803 ntBASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85cE9Q6B2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gm4959-201ENSMUST00000197271 1044 ntBASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc85cE9Q6B2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Gm27839-201ENSMUST00000184242 106 ntBASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Gm43179-201ENSMUST00000198797 275 ntBASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 CT009713.10-202ENSMUST00000225734 696 ntBASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc85cE9Q6B2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc85cE9Q6B2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccdc85cE9Q6B2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms