Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Gm45880-201ENSMUST00000213041 853 ntBASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.98□□□□□ -0.01
Col6a3E9PWQ3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a3E9PWQ3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a3E9PWQ3 Gm8566-201ENSMUST00000120174 465 ntBASIC14.96□□□□□ -0.02
Col6a3E9PWQ3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.96□□□□□ -0.02
Col6a3E9PWQ3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a3E9PWQ3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a3E9PWQ3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a3E9PWQ3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a3E9PWQ3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a3E9PWQ3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms