Protein–RNA interactions for Protein: D3YXK1

Samd1, Atherin, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd1D3YXK1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samd1D3YXK1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.35■□□□□ 0.37
Samd1D3YXK1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.35■□□□□ 0.37
Samd1D3YXK1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samd1D3YXK1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Gm44450-201ENSMUST00000199528 114 ntBASIC17.34■□□□□ 0.37
Samd1D3YXK1 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.34■□□□□ 0.37
Samd1D3YXK1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Samd1D3YXK1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samd1D3YXK1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Samd1D3YXK1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.33■□□□□ 0.37
Samd1D3YXK1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Samd1D3YXK1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Samd1D3YXK1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Samd1D3YXK1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samd1D3YXK1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.33■□□□□ 0.36
Samd1D3YXK1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.33■□□□□ 0.36
Samd1D3YXK1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.33■□□□□ 0.36
Samd1D3YXK1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Samd1D3YXK1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.32■□□□□ 0.36
Samd1D3YXK1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.32■□□□□ 0.36
Samd1D3YXK1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Samd1D3YXK1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms