Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.79□□□□□ -0.36
BC048679D3YXE9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.79□□□□□ -0.36
BC048679D3YXE9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC048679D3YXE9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC048679D3YXE9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC048679D3YXE9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC048679D3YXE9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC048679D3YXE9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC048679D3YXE9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC048679D3YXE9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC048679D3YXE9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
BC048679D3YXE9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gm6345-202ENSMUST00000180900 204 ntBASIC12.77□□□□□ -0.37
BC048679D3YXE9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC048679D3YXE9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms