Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.38□□□□□ -0.59
Col6a5A6H584 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Gm4857-201ENSMUST00000192718 785 ntBASIC11.38□□□□□ -0.59
Col6a5A6H584 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.38□□□□□ -0.59
Col6a5A6H584 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Gm3961-201ENSMUST00000204425 994 ntBASIC11.38□□□□□ -0.59
Col6a5A6H584 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Gm37811-201ENSMUST00000192416 2601 ntBASIC11.37□□□□□ -0.59
Col6a5A6H584 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.37□□□□□ -0.59
Col6a5A6H584 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.37□□□□□ -0.59
Col6a5A6H584 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.37□□□□□ -0.59
Col6a5A6H584 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Gm22902-201ENSMUST00000158488 302 ntBASIC11.37□□□□□ -0.59
Col6a5A6H584 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a5A6H584 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.37□□□□□ -0.59
Col6a5A6H584 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.37□□□□□ -0.59
Col6a5A6H584 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a5A6H584 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a5A6H584 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a5A6H584 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a5A6H584 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms