Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.83□□□□□ -0.36
Col6a4A2AX52 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.83□□□□□ -0.36
Col6a4A2AX52 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.83□□□□□ -0.36
Col6a4A2AX52 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.83□□□□□ -0.36
Col6a4A2AX52 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.83□□□□□ -0.36
Col6a4A2AX52 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col6a4A2AX52 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a4A2AX52 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Gm13453-201ENSMUST00000118708 357 ntBASIC12.82□□□□□ -0.36
Col6a4A2AX52 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.82□□□□□ -0.36
Col6a4A2AX52 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.82□□□□□ -0.36
Col6a4A2AX52 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Gm13015-201ENSMUST00000118674 204 ntBASIC12.82□□□□□ -0.36
Col6a4A2AX52 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Col6a4A2AX52 Mir8102-201ENSMUST00000184148 139 ntBASIC12.82□□□□□ -0.36
Col6a4A2AX52 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.82□□□□□ -0.36
Col6a4A2AX52 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Gm7488-201ENSMUST00000117148 684 ntBASIC12.81□□□□□ -0.36
Col6a4A2AX52 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a4A2AX52 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a4A2AX52 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms