Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igkv1-117A0A140T8M0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm12527-201ENSMUST00000117967 564 ntBASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm6257-201ENSMUST00000163864 910 ntBASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv1-117A0A140T8M0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Gm7367-201ENSMUST00000057611 492 ntBASIC10.07□□□□□ -0.8
Igkv1-117A0A140T8M0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms