Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Mir1668-201ENSMUST00000184114 107 ntBASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv3A0A0A6YYE2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms