Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6n-6A0A075B6B2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav6n-6A0A075B6B2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6n-6A0A075B6B2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6n-6A0A075B6B2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.4□□□□□ -0.59
Trav6n-6A0A075B6B2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6n-6A0A075B6B2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm6345-202ENSMUST00000180900 204 ntBASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm29518-201ENSMUST00000190858 372 ntBASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6n-6A0A075B6B2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Efs-202ENSMUST00000227037 2540 ntBASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm33142-201ENSMUST00000193913 867 ntBASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm17808-201ENSMUST00000200859 894 ntBASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms