Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav18A0A075B656 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Gm12497-201ENSMUST00000138778 237 ntBASIC12.49□□□□□ -0.41
Trav18A0A075B656 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.49□□□□□ -0.41
Trav18A0A075B656 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav18A0A075B656 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Gm8344-201ENSMUST00000119813 856 ntBASIC12.48□□□□□ -0.41
Trav18A0A075B656 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.48□□□□□ -0.41
Trav18A0A075B656 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.48□□□□□ -0.41
Trav18A0A075B656 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav18A0A075B656 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav18A0A075B656 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.47□□□□□ -0.41
Trav18A0A075B656 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.47□□□□□ -0.41
Trav18A0A075B656 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.47□□□□□ -0.41
Trav18A0A075B656 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.47□□□□□ -0.41
Trav18A0A075B656 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms