Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.1□□□□□ -0.47
Trav17A0A075B655 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Gm14722-201ENSMUST00000118943 689 ntBASIC12.1□□□□□ -0.47
Trav17A0A075B655 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gm6623-201ENSMUST00000173570 544 ntBASIC12.09□□□□□ -0.47
Trav17A0A075B655 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.09□□□□□ -0.47
Trav17A0A075B655 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav17A0A075B655 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.08□□□□□ -0.47
Trav17A0A075B655 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav17A0A075B655 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav17A0A075B655 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Trav17A0A075B655 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.08□□□□□ -0.48
Trav17A0A075B655 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.08□□□□□ -0.48
Trav17A0A075B655 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.08□□□□□ -0.48
Trav17A0A075B655 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav17A0A075B655 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms