Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.46□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.46□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav15-2-dv6-2A0A075B650 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm14722-201ENSMUST00000118943 689 ntBASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm15565-201ENSMUST00000118890 427 ntBASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm9013-201ENSMUST00000132939 882 ntBASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms