Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Gm20049-201ENSMUST00000219950 730 ntBASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7n-4A0A075B620 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Gm10698-201ENSMUST00000182663 604 ntBASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Mir6404-201ENSMUST00000183699 94 ntBASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7n-4A0A075B620 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7n-4A0A075B620 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7n-4A0A075B620 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms