Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav16d-dv11A0A075B617 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm37856-201ENSMUST00000191634 999 ntBASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav16d-dv11A0A075B617 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm8495-201ENSMUST00000188740 694 ntBASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Odf3b-204ENSMUST00000227834 930 ntBASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms