Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm6345-202ENSMUST00000180900 204 ntBASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm44454-201ENSMUST00000198541 138 ntBASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Celf4-206ENSMUST00000224553 1729 ntBASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-1A0A075B5Z8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-1A0A075B5Z8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-1A0A075B5Z8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms