Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm7213-201ENSMUST00000215977 950 ntBASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm7370-201ENSMUST00000219471 767 ntBASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm21559-201ENSMUST00000220638 855 ntBASIC11.73□□□□□ -0.53
PdfS4R2K0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm8587-201ENSMUST00000076538 843 ntBASIC11.73□□□□□ -0.53
PdfS4R2K0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Phf7-203ENSMUST00000226565 1971 ntBASIC11.72□□□□□ -0.53
PdfS4R2K0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Gm13186-201ENSMUST00000118031 316 ntBASIC11.72□□□□□ -0.53
PdfS4R2K0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.72□□□□□ -0.53
PdfS4R2K0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.72□□□□□ -0.53
PdfS4R2K0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PdfS4R2K0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdfS4R2K0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
PdfS4R2K0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PdfS4R2K0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.71□□□□□ -0.53
PdfS4R2K0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
PdfS4R2K0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PdfS4R2K0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.71□□□□□ -0.53
PdfS4R2K0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PdfS4R2K0 Gm36967-201ENSMUST00000193814 266 ntBASIC11.71□□□□□ -0.53
PdfS4R2K0 Gm18115-201ENSMUST00000221209 621 ntBASIC11.71□□□□□ -0.53
PdfS4R2K0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
PdfS4R2K0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdfS4R2K0 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.71□□□□□ -0.54
PdfS4R2K0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdfS4R2K0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdfS4R2K0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms