Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Gm25745-201ENSMUST00000174945 133 ntBASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Gm27704-201ENSMUST00000185094 107 ntBASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.73□□□□□ -0.21
H2afb3S4R1G7 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.73□□□□□ -0.21
H2afb3S4R1G7 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
H2afb3S4R1G7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Gm8344-201ENSMUST00000119813 856 ntBASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb3S4R1G7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Gm12497-201ENSMUST00000138778 237 ntBASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb3S4R1G7 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms