Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Phf1Q9Z1B8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Gm11764-201ENSMUST00000120221 623 ntBASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Phf1Q9Z1B8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Gm8344-201ENSMUST00000119813 856 ntBASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Phf1Q9Z1B8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Gm15358-201ENSMUST00000119249 520 ntBASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Gm43575-201ENSMUST00000196420 516 ntBASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phf1Q9Z1B8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.02□□□□□ -0.16
Phf1Q9Z1B8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms