Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Gm29541-201ENSMUST00000191351 678 ntBASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm22065-201ENSMUST00000103753 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm22066-201ENSMUST00000103761 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24932-201ENSMUST00000103763 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24115-201ENSMUST00000103799 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm22190-201ENSMUST00000103827 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm22191-201ENSMUST00000103831 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24721-201ENSMUST00000103849 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm28018-201ENSMUST00000103869 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm26399-201ENSMUST00000103937 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm25349-201ENSMUST00000177728 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm23616-201ENSMUST00000177797 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm25871-201ENSMUST00000177816 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24752-201ENSMUST00000178240 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24496-201ENSMUST00000178287 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm25649-201ENSMUST00000178476 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm25548-201ENSMUST00000178681 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm23147-201ENSMUST00000178841 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm26095-201ENSMUST00000179270 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm22171-201ENSMUST00000179283 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm23936-201ENSMUST00000179354 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm22619-201ENSMUST00000179516 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm25255-201ENSMUST00000179579 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24755-201ENSMUST00000179691 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm26506-201ENSMUST00000179692 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm25086-201ENSMUST00000179931 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm23243-201ENSMUST00000180047 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24659-201ENSMUST00000180212 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm24169-201ENSMUST00000180244 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm23689-201ENSMUST00000180354 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm27359-201ENSMUST00000184153 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm27785-201ENSMUST00000184268 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm27466-201ENSMUST00000184396 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm27703-201ENSMUST00000184836 110 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn8aQ9WTU3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn8aQ9WTU3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms