Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.16□□□□□ -0.14
Htra1Q9R118 Gm23634-201ENSMUST00000175071 91 ntBASIC14.16□□□□□ -0.14
Htra1Q9R118 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.16□□□□□ -0.14
Htra1Q9R118 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Htra1Q9R118 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.16□□□□□ -0.14
Htra1Q9R118 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.16□□□□□ -0.14
Htra1Q9R118 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Htra1Q9R118 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.15□□□□□ -0.14
Htra1Q9R118 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Gm6623-201ENSMUST00000173570 544 ntBASIC14.15□□□□□ -0.14
Htra1Q9R118 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Htra1Q9R118 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.15□□□□□ -0.14
Htra1Q9R118 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.15□□□□□ -0.14
Htra1Q9R118 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.15□□□□□ -0.14
Htra1Q9R118 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Htra1Q9R118 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.14□□□□□ -0.15
Htra1Q9R118 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.14□□□□□ -0.15
Htra1Q9R118 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Htra1Q9R118 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.14□□□□□ -0.15
Htra1Q9R118 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 AA414768-201ENSMUST00000121924 1257 ntBASIC14.14□□□□□ -0.15
Htra1Q9R118 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.14□□□□□ -0.15
Htra1Q9R118 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Htra1Q9R118 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Htra1Q9R118 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.13□□□□□ -0.15
Htra1Q9R118 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Gm11950-201ENSMUST00000121615 838 ntBASIC14.13□□□□□ -0.15
Htra1Q9R118 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.13□□□□□ -0.15
Htra1Q9R118 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 Gm45328-201ENSMUST00000210942 917 ntBASIC14.13□□□□□ -0.15
Htra1Q9R118 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Htra1Q9R118 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.13□□□□□ -0.15
Htra1Q9R118 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms