Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trem1Q9JKE2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Gm12085-201ENSMUST00000119263 940 ntBASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Gm9731-201ENSMUST00000209480 747 ntBASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trem1Q9JKE2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.68□□□□□ -0.22
Trem1Q9JKE2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Gm7638-201ENSMUST00000121348 967 ntBASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.67□□□□□ -0.22
Trem1Q9JKE2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Gm10602-201ENSMUST00000098239 609 ntBASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trem1Q9JKE2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms