Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Gm6222-201ENSMUST00000120787 396 ntBASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Gm42612-201ENSMUST00000197986 623 ntBASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Gm43170-201ENSMUST00000199827 612 ntBASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Cacna1fQ9JIS7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Gm37230-201ENSMUST00000194491 818 ntBASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Gm27631-201ENSMUST00000184163 466 ntBASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1fQ9JIS7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1fQ9JIS7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.09■□□□□ 0.33
Cacna1fQ9JIS7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms